Reference documentation for deal.II version 9.1.0-pre
dof_info.h
1 // ---------------------------------------------------------------------
2 //
3 // Copyright (C) 2011 - 2018 by the deal.II authors
4 //
5 // This file is part of the deal.II library.
6 //
7 // The deal.II library is free software; you can use it, redistribute
8 // it, and/or modify it under the terms of the GNU Lesser General
9 // Public License as published by the Free Software Foundation; either
10 // version 2.1 of the License, or (at your option) any later version.
11 // The full text of the license can be found in the file LICENSE.md at
12 // the top level directory of deal.II.
13 //
14 // ---------------------------------------------------------------------
15 
16 
17 #ifndef dealii_matrix_free_dof_info_h
18 #define dealii_matrix_free_dof_info_h
19 
20 
21 #include <deal.II/base/exceptions.h>
22 #include <deal.II/base/partitioner.h>
23 #include <deal.II/base/vectorization.h>
24 
25 #include <deal.II/dofs/dof_handler.h>
26 
27 #include <deal.II/lac/affine_constraints.h>
28 #include <deal.II/lac/dynamic_sparsity_pattern.h>
29 
30 #include <deal.II/matrix_free/face_info.h>
31 #include <deal.II/matrix_free/task_info.h>
32 
33 #include <array>
34 #include <memory>
35 
36 
37 DEAL_II_NAMESPACE_OPEN
38 
39 namespace internal
40 {
41  namespace MatrixFreeFunctions
42  {
43  template <typename Number>
44  struct ConstraintValues;
45 
66  struct DoFInfo
67  {
78  static const unsigned int chunk_size_zero_vector = 8192;
79 
83  DoFInfo();
84 
88  DoFInfo(const DoFInfo &) = default;
89 
93  void
94  clear();
95 
101  unsigned int
102  fe_index_from_degree(const unsigned int first_selected_component,
103  const unsigned int fe_degree) const;
104 
113  template <typename number>
114  void
116  const std::vector<types::global_dof_index> &local_indices,
117  const std::vector<unsigned int> & lexicographic_inv,
118  const AffineConstraints<number> & constraints,
119  const unsigned int cell_number,
120  ConstraintValues<double> & constraint_values,
121  bool & cell_at_boundary);
122 
130  void
131  assign_ghosts(const std::vector<unsigned int> &boundary_cells);
132 
139  void
140  reorder_cells(const TaskInfo & task_info,
141  const std::vector<unsigned int> & renumbering,
142  const std::vector<unsigned int> & constraint_pool_row_index,
143  const std::vector<unsigned char> &irregular_cells);
144 
149  void
151  const std::vector<unsigned char> &irregular_cells);
152 
157  template <int length>
158  void
160  const std::vector<FaceToCellTopology<length>> &faces);
161 
167  void
168  make_connectivity_graph(const TaskInfo & task_info,
169  const std::vector<unsigned int> &renumbering,
170  DynamicSparsityPattern &connectivity) const;
171 
182  void
184  std::vector<types::global_dof_index> &renumbering);
185 
195  template <int length>
196  void
198  const TaskInfo & task_info,
199  const std::vector<FaceToCellTopology<length>> &faces);
200 
204  std::size_t
205  memory_consumption() const;
206 
211  template <typename StreamType>
212  void
213  print_memory_consumption(StreamType & out,
214  const TaskInfo &size_info) const;
215 
220  template <typename Number>
221  void
222  print(const std::vector<Number> & constraint_pool_data,
223  const std::vector<unsigned int> &constraint_pool_row_index,
224  std::ostream & out) const;
225 
237  enum class IndexStorageVariants : unsigned char
238  {
247  full,
259  interleaved,
268  contiguous
269  };
270 
275  enum DoFAccessIndex : unsigned char
276  {
289  };
290 
296  unsigned int dimension;
297 
306  unsigned int vectorization_length;
307 
315  std::vector<IndexStorageVariants> index_storage_variants[3];
316 
323  std::vector<std::pair<unsigned int, unsigned int>> row_starts;
324 
340  std::vector<unsigned int> dof_indices;
341 
351  std::vector<std::pair<unsigned short, unsigned short>>
353 
357  std::vector<unsigned int> dof_indices_interleaved;
358 
367  std::vector<unsigned int> dof_indices_contiguous[3];
368 
378  std::vector<unsigned char> n_vectorization_lanes_filled[3];
379 
386  std::shared_ptr<const Utilities::MPI::Partitioner> vector_partitioner;
387 
399  std::array<std::shared_ptr<const Utilities::MPI::Partitioner>, 3>
401 
406  std::vector<unsigned int> constrained_dofs;
407 
412  std::vector<unsigned int> row_starts_plain_indices;
413 
422  std::vector<unsigned int> plain_dof_indices;
423 
429 
434  unsigned int n_base_elements;
435 
440  std::vector<unsigned int> n_components;
441 
446  std::vector<unsigned int> start_components;
447 
452  std::vector<unsigned int> component_to_base_index;
453 
465  std::vector<std::vector<unsigned int>> component_dof_indices_offset;
466 
470  std::vector<unsigned int> dofs_per_cell;
471 
475  std::vector<unsigned int> dofs_per_face;
476 
481 
485  std::vector<unsigned int> cell_active_fe_index;
486 
491  unsigned int max_fe_index;
492 
498  std::vector<std::vector<unsigned int>> fe_index_conversion;
499 
505  std::vector<types::global_dof_index> ghost_dofs;
506 
512  std::vector<unsigned int> vector_zero_range_list_index;
513 
517  std::vector<unsigned int> vector_zero_range_list;
518  };
519 
520 
521  /*-------------------------- Inline functions ---------------------------*/
522 
523 #ifndef DOXYGEN
524 
525 
526  inline unsigned int
527  DoFInfo::fe_index_from_degree(const unsigned int first_selected_component,
528  const unsigned int fe_degree) const
529  {
530  const unsigned int n_indices = fe_index_conversion.size();
531  if (n_indices <= 1)
532  return 0;
533  for (unsigned int i = 0; i < n_indices; ++i)
534  if (fe_index_conversion[i][first_selected_component] == fe_degree)
535  return i;
537  }
538 
539 #endif // ifndef DOXYGEN
540 
541  } // end of namespace MatrixFreeFunctions
542 } // end of namespace internal
543 
544 DEAL_II_NAMESPACE_CLOSE
545 
546 #endif
std::vector< unsigned int > plain_dof_indices
Definition: dof_info.h:422
unsigned int fe_index_from_degree(const unsigned int first_selected_component, const unsigned int fe_degree) const
static const unsigned int invalid_unsigned_int
Definition: types.h:173
std::vector< unsigned int > component_to_base_index
Definition: dof_info.h:452
std::vector< IndexStorageVariants > index_storage_variants[3]
Definition: dof_info.h:315
void make_connectivity_graph(const TaskInfo &task_info, const std::vector< unsigned int > &renumbering, DynamicSparsityPattern &connectivity) const
std::shared_ptr< const Utilities::MPI::Partitioner > vector_partitioner
Definition: dof_info.h:386
std::vector< unsigned int > vector_zero_range_list_index
Definition: dof_info.h:512
std::size_t memory_consumption() const
std::vector< unsigned int > dof_indices
Definition: dof_info.h:340
std::vector< unsigned char > n_vectorization_lanes_filled[3]
Definition: dof_info.h:378
std::vector< unsigned int > dofs_per_face
Definition: dof_info.h:475
void compute_dof_renumbering(std::vector< types::global_dof_index > &renumbering)
void compute_cell_index_compression(const std::vector< unsigned char > &irregular_cells)
std::vector< unsigned int > dof_indices_interleaved
Definition: dof_info.h:357
std::vector< unsigned int > row_starts_plain_indices
Definition: dof_info.h:412
std::vector< std::vector< unsigned int > > fe_index_conversion
Definition: dof_info.h:498
std::vector< std::pair< unsigned int, unsigned int > > row_starts
Definition: dof_info.h:323
void compute_vector_zero_access_pattern(const TaskInfo &task_info, const std::vector< FaceToCellTopology< length >> &faces)
std::vector< std::pair< unsigned short, unsigned short > > constraint_indicator
Definition: dof_info.h:352
void print_memory_consumption(StreamType &out, const TaskInfo &size_info) const
void compute_face_index_compression(const std::vector< FaceToCellTopology< length >> &faces)
std::vector< types::global_dof_index > ghost_dofs
Definition: dof_info.h:505
std::vector< unsigned int > cell_active_fe_index
Definition: dof_info.h:485
std::vector< unsigned int > dof_indices_contiguous[3]
Definition: dof_info.h:367
std::vector< std::vector< unsigned int > > component_dof_indices_offset
Definition: dof_info.h:465
std::vector< unsigned int > dofs_per_cell
Definition: dof_info.h:470
std::vector< unsigned int > constrained_dofs
Definition: dof_info.h:406
void print(const std::vector< Number > &constraint_pool_data, const std::vector< unsigned int > &constraint_pool_row_index, std::ostream &out) const
std::vector< unsigned int > vector_zero_range_list
Definition: dof_info.h:517
void read_dof_indices(const std::vector< types::global_dof_index > &local_indices, const std::vector< unsigned int > &lexicographic_inv, const AffineConstraints< number > &constraints, const unsigned int cell_number, ConstraintValues< double > &constraint_values, bool &cell_at_boundary)
std::vector< unsigned int > start_components
Definition: dof_info.h:446
void reorder_cells(const TaskInfo &task_info, const std::vector< unsigned int > &renumbering, const std::vector< unsigned int > &constraint_pool_row_index, const std::vector< unsigned char > &irregular_cells)
std::vector< unsigned int > n_components
Definition: dof_info.h:440
static const unsigned int chunk_size_zero_vector
Definition: dof_info.h:78
void assign_ghosts(const std::vector< unsigned int > &boundary_cells)
std::array< std::shared_ptr< const Utilities::MPI::Partitioner >, 3 > vector_partitioner_face_variants
Definition: dof_info.h:400