histogram.cc

// ---------------------------------------------------------------------
//
// Copyright (C) 1999 - 2017 by the deal.II authors
//
// This file is part of the deal.II library.
//
// The deal.II library is free software; you can use it, redistribute
// it, and/or modify it under the terms of the GNU Lesser General
// Public License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
// The full text of the license can be found in the file LICENSE.md at
// the top level directory of deal.II.
//
// ---------------------------------------------------------------------

#include <deal.II/base/memory_consumption.h>

#include <deal.II/lac/vector.h>

#include <deal.II/numerics/histogram.h>

#include <algorithm>
#include <cmath>

DEAL_II_NAMESPACE_OPEN


template <typename number>
bool
Histogram::logarithmic_less(const number n1, const number n2)
{
  return (((n1 < n2) && (n1 > 0)) || ((n1 < n2) && (n2 <= 0)) ||
          ((n2 < n1) && (n1 > 0) && (n2 <= 0)));
}



Histogram::Interval::Interval(const double left_point, const double right_point)
  : left_point(left_point)
  , right_point(right_point)
  , content(0)
{}



std::size_t
Histogram::Interval::memory_consumption() const
{
  return sizeof(*this);
}



template <typename number>
void
Histogram::evaluate(const std::vector<Vector<number>> &values,
                    const std::vector<double> &        y_values_,
                    const unsigned int                 n_intervals,
                    const IntervalSpacing              interval_spacing)
{
  Assert(values.size() > 0,
         ExcMessage(
           "Your input data needs to contain at least one input vector."));
  Assert(n_intervals > 0,
         ExcMessage("The number of intervals needs to be at least one."));
  for (unsigned int i = 0; i < values.size(); ++i)
    Assert(values[i].size() > 0, ExcEmptyData());
  Assert(values.size() == y_values_.size(),
         ExcIncompatibleArraySize(values.size(), y_values_.size()));

  // store y_values
  y_values = y_values_;

  // first find minimum and maximum value
  // in the indicators
  number min_value = 0, max_value = 0;
  switch (interval_spacing)
    {
      case linear:
        {
          min_value = *std::min_element(values[0].begin(), values[0].end());
          max_value = *std::max_element(values[0].begin(), values[0].end());

          for (unsigned int i = 1; i < values.size(); ++i)
            {
              min_value =
                std::min(min_value,
                         *std::min_element(values[i].begin(), values[i].end()));
              max_value =
                std::max(max_value,
                         *std::max_element(values[i].begin(), values[i].end()));
            };

          break;
        };

      case logarithmic:
        {
          const auto logarithmic_less_function =
            &Histogram::template logarithmic_less<number>;

          min_value = *std::min_element(values[0].begin(),
                                        values[0].end(),
                                        logarithmic_less_function);

          max_value = *std::max_element(values[0].begin(),
                                        values[0].end(),
                                        logarithmic_less_function);

          for (unsigned int i = 1; i < values.size(); ++i)
            {
              min_value = std::min(min_value,
                                   *std::min_element(values[i].begin(),
                                                     values[i].end(),
                                                     logarithmic_less_function),
                                   logarithmic_less_function);

              max_value = std::max(max_value,
                                   *std::max_element(values[i].begin(),
                                                     values[i].end(),
                                                     logarithmic_less_function),
                                   logarithmic_less_function);
            }

          break;
        }

      default:
        Assert(false, ExcInternalError());
    }

  // move right bound arbitrarily if
  // necessary. sometimes in logarithmic
  // mode, max_value may be larger than
  // min_value, but only up to rounding
  // precision.
  if (max_value <= min_value)
    max_value = min_value + 1;


  // now set up the intervals based on
  // the min and max values
  intervals.clear();
  // set up one list of intervals
  // for the first data vector. we will
  // then produce all the other lists
  // for the other data vectors by
  // copying
  intervals.emplace_back();

  switch (interval_spacing)
    {
      case linear:
        {
          const float delta = (max_value - min_value) / n_intervals;

          for (unsigned int n = 0; n < n_intervals; ++n)
            intervals[0].emplace_back(min_value + n * delta,
                                      min_value + (n + 1) * delta);

          break;
        };

      case logarithmic:
        {
          const float delta =
            (std::log(max_value) - std::log(min_value)) / n_intervals;

          for (unsigned int n = 0; n < n_intervals; ++n)
            intervals[0].emplace_back(std::exp(std::log(min_value) + n * delta),
                                      std::exp(std::log(min_value) +
                                               (n + 1) * delta));

          break;
        };

      default:
        Assert(false, ExcInternalError());
    };

  // fill the other lists of intervals
  for (unsigned int i = 1; i < values.size(); ++i)
    intervals.push_back(intervals[0]);


  // finally fill the intervals
  for (unsigned int i = 0; i < values.size(); ++i)
    for (typename Vector<number>::const_iterator p = values[i].begin();
         p < values[i].end();
         ++p)
      {
        // find the right place for *p in
        // intervals[i]. use regular
        // operator< here instead of
        // the logarithmic one to
        // map negative or zero value
        // to the leftmost interval always
        for (unsigned int n = 0; n < n_intervals; ++n)
          if (*p <= intervals[i][n].right_point)
            {
              ++intervals[i][n].content;
              break;
            };
      };
}



template <typename number>
void
Histogram::evaluate(const Vector<number> &values,
                    const unsigned int    n_intervals,
                    const IntervalSpacing interval_spacing)
{
  std::vector<Vector<number>> values_list(1, values);
  evaluate(values_list,
           std::vector<double>(1, 0.),
           n_intervals,
           interval_spacing);
}



void
Histogram::write_gnuplot(std::ostream &out) const
{
  AssertThrow(out, ExcIO());
  Assert(!intervals.empty(),
         ExcMessage("There is nothing to write into the output file. "
                    "Did you forget to call the evaluate() function?"));

  // do a simple 2d plot, if only
  // one data set is available
  if (intervals.size() == 1)
    {
      for (unsigned int n = 0; n < intervals[0].size(); ++n)
        out << intervals[0][n].left_point << ' ' << intervals[0][n].content
            << std::endl
            << intervals[0][n].right_point << ' ' << intervals[0][n].content
            << std::endl;
    }
  else
    // otherwise create a whole 3d plot
    // for the data. use th patch method
    // of gnuplot for this
    //
    // run this loop backwards since otherwise
    // gnuplot thinks the upper side is the
    // lower side and draws the diagram in
    // strange colors
    for (int i = intervals.size() - 1; i >= 0; --i)
      {
        for (unsigned int n = 0; n < intervals[i].size(); ++n)
          out << intervals[i][n].left_point << ' '
              << (i < static_cast<int>(intervals.size()) - 1 ?
                    y_values[i + 1] :
                    y_values[i] + (y_values[i] - y_values[i - 1]))
              << ' ' << intervals[i][n].content << std::endl
              << intervals[i][n].right_point << ' '
              << (i < static_cast<int>(intervals.size()) - 1 ?
                    y_values[i + 1] :
                    y_values[i] + (y_values[i] - y_values[i - 1]))
              << ' ' << intervals[i][n].content << std::endl;

        out << std::endl;
        for (unsigned int n = 0; n < intervals[i].size(); ++n)
          out << intervals[i][n].left_point << ' ' << y_values[i] << ' '
              << intervals[i][n].content << std::endl
              << intervals[i][n].right_point << ' ' << y_values[i] << ' '
              << intervals[i][n].content << std::endl;

        out << std::endl;
      };

  AssertThrow(out, ExcIO());
}



std::string
Histogram::get_interval_spacing_names()
{
  return "linear|logarithmic";
}



Histogram::IntervalSpacing
Histogram::parse_interval_spacing(const std::string &name)
{
  if (name == "linear")
    return linear;
  else if (name == "logarithmic")
    return logarithmic;
  else
    {
      AssertThrow(false, ExcInvalidName(name));

      return linear;
    };
}



std::size_t
Histogram::memory_consumption() const
{
  return (MemoryConsumption::memory_consumption(intervals) +
          MemoryConsumption::memory_consumption(y_values));
}



// explicit instantiations for float
template void
Histogram::evaluate<float>(const std::vector<Vector<float>> &values,
                           const std::vector<double> &       y_values,
                           const unsigned int                n_intervals,
                           const IntervalSpacing             interval_spacing);
template void
Histogram::evaluate<float>(const Vector<float> & values,
                           const unsigned int    n_intervals,
                           const IntervalSpacing interval_spacing);


// explicit instantiations for double
template void
Histogram::evaluate<double>(const std::vector<Vector<double>> &values,
                            const std::vector<double> &        y_values,
                            const unsigned int                 n_intervals,
                            const IntervalSpacing interval_spacing);
template void
Histogram::evaluate<double>(const Vector<double> &values,
                            const unsigned int    n_intervals,
                            const IntervalSpacing interval_spacing);

DEAL_II_NAMESPACE_CLOSE